The Human Neural Organoid Atlas

Main

Cell Metadata

Microglia

Ontology Term: microglial cellCL:0000129
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: brain-resident macrophage, microgliocyte, MF.microglia.CNS, brain macrophage, microglia, hortega cells
Category Class of which the cell type is a subclass.: central nervous system macrophageCL:0000878
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: AIF1
Canonical Marker Genes: AIF1
Rationale: Cells expressing canonical microglial markers in organoids.

Set of Labels Description: High-level curated cell type annotation of the integrated HNOCA.
Annotation Method: both
Algorithm Name: snapseed
Algorithm Version: 0.1.0
Algorithm URL: https://github.com/devsystemslab/snapseed

Ontology Term: microglial cellCL:0000129
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: brain-resident macrophage, microgliocyte, MF.microglia.CNS, brain macrophage, microglia, hortega cells
Category Class of which the cell type is a subclass.: central nervous system macrophageCL:0000878
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: AIF1
Canonical Marker Genes: AIF1
Rationale: Cells expressing canonical microglial markers in organoids.

Set of Labels Description: High-level curated cell type annotation of the integrated HNOCA.
Annotation Method: both
Algorithm Name: snapseed
Algorithm Version: 0.1.0
Algorithm URL: https://github.com/devsystemslab/snapseed