Cell Annotation Platform
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v1
An integrated transcriptomic cell atlas of human neural organoids
The Human Neural Organoid Atlas
The Human Neural Organoid Atlas
Main
Summary
Feedback Received
Cell Metadata
cell_type
annot_level_1
annot_level_2
Ventral Telencephalic Neuron
Ontology Term
inhibitory interneuron
CL:0000498
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
interneuron
CL:0000099
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
—
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
FOXG1
,
DLX2
,
SLC32A1
Canonical Marker Genes
FOXG1
,
DLX2
,
SLC32A1
Rationale
Cells expressing canonical ventral telencephalic neuron markers in organoids.
Inherited from annot_level_2
Set of Labels Description
Finer curated cell type annotation of the integrated HNOCA.
Annotation Method
both
Algorithm Name
snapseed
Algorithm Version
0.1.0
Algorithm URL
https://github.com/devsystemslab/snapseed
Molecular Data
Download Dataset