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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
CD45 negative cells from human liver dataset
CD45 negative cells from human liver dataset
Main
Summary
Feedback Received
Cell Metadata
author_cell_type
Cholangiocytes
Ontology Term
cholangiocyte
CL:1000488
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
branched duct epithelial cell
CL:0000069
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
—
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
CHST4
,
KCNJ16
,
FXYD2
,
SFRP5
,
KCNJ15
,
SLC5A1
,
EHF
,
KRT7
,
SCGN
,
DCDC2
Canonical Marker Genes
DCDC2
,
BICC1
Rationale
The marker genes are the top 10 DEGs for this population compared with other cell types in UMAP (from Table S3 in publication).
Inherited from author_cell_type
Set of Labels Description
Annotation of cell types included in dataset based on prior knowledge.
Annotation Method
manual
Molecular Data
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