CD45 negative cells from human liver dataset

Main

Cell Metadata

Central Vein Endothelial cells

Ontology Term: endothelial cell of central vein of liverCL:4033061
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: vein endothelial cellCL:0002543
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PKHD1L1, HS3ST1, RAB3C, PTGS1, ST8SIA6, PGM5, PLCXD3, DGKG, VWF, SYT15
Canonical Marker Genes: RSPO3, VWF
Rationale: The marker genes are the top 10 DEGs for this population compared with all other cell types in the UMAP (from Table S3 in publication).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge.
Annotation Method: manual

Ontology Term: endothelial cell of central vein of liverCL:4033061
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: vein endothelial cellCL:0002543
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PKHD1L1, HS3ST1, RAB3C, PTGS1, ST8SIA6, PGM5, PLCXD3, DGKG, VWF, SYT15
Canonical Marker Genes: RSPO3, VWF
Rationale: The marker genes are the top 10 DEGs for this population compared with all other cell types in the UMAP (from Table S3 in publication).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge.
Annotation Method: manual