Myeloid cells from human liver dataset

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Cell Metadata

cDC2s

Ontology Term: conventional dendritic cellCL:0000990
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: cDC2, Type 2 conventional dendritic cell
Category Class of which the cell type is a subclass.: dendritic cellCL:0000451
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FCER1A, PPP1R14A, CD1C, AKR1C3, ENHO, CD1E, SLC38A1, P2RY14, AFF3, FCGR2B
Canonical Marker Genes: CD1C, FLT3
Rationale: The marker genes are the top 10 DEGs for this population compared with the rest in the UMAP (From Table S2 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual

Ontology Term: conventional dendritic cellCL:0000990
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: cDC2, Type 2 conventional dendritic cell
Category Class of which the cell type is a subclass.: dendritic cellCL:0000451
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FCER1A, PPP1R14A, CD1C, AKR1C3, ENHO, CD1E, SLC38A1, P2RY14, AFF3, FCGR2B
Canonical Marker Genes: CD1C, FLT3
Rationale: The marker genes are the top 10 DEGs for this population compared with the rest in the UMAP (From Table S2 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual