Myeloid cells from human liver dataset

Pre-moKCs and moKCs

Full Name

Monocyte-derived Kupffer cell

Closest Ontology Term

Kupffer cellCL:0000091

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

MoKCs

Category

Class of which the cell type is a subclass.

macrophageCL:0000235

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

—

Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

RNASE1, IGSF21, FCGBP, LILRB5, SLCO2B1, C1QC, SELENOP, PLTP, MRC1, NRP1

Canonical Marker Genes

unknown

Negative Marker Genes

Genes expected to be absent, or expressed at a notably low level, in these cells, and whose absence supports the assignment of this cell annotation.

—

Rationale

Marker genes are top 10 DEGs for this population compared with other cell types in the UMAP (from Table S2 in publication).

Inherited from author_cell_type

Set of Labels Description

Annotation of cell types in dataset based on prior knowledge

Annotation Method

manual