HMBA Consensus Basal Ganglia Atlas: Dopaminergic

Summary

Dopaminergic

Metadata

Dataset Type

Single. The file includes a single dataset whereby “dataset” means a single library or a set of technical replicates that can be combined without having to worry about the associated batch effect.

Total Cells

8,775

organism

Macaca Mulatta (4,016 cells)Homo sapiens (2,655 cells)Callithrix jacchus (2,104 cells)

tissue

brain

assay

10x multiome

disease

normal

Cell Labels

Neighborhood (1)

8,775 cells

Glut Sero Dopa

8,775

Class (1)

8,775 cells

M Dopa

8,775

Subclass (1)

8,775 cells

M Dopa

8,775

Group (3)

8,775 cells

SN SOX6 Dopa

6,793

SN-VTR CALB1 Dopa

1,158

SN-VTR GAD2 Dopa

824

cluster_id (46)

8,775 cells

Human-122

1,950

Macaque-476

850

Macaque-484

849

Macaque-477

475

Macaque-475

393

Macaque-485

353

Macaque-486

319

Marmoset-1446

300

Marmoset-1456

237

Marmoset-1441

200

Macaque-478

196

Macaque-482

175

Human-119

164

Macaque-483

160

Marmoset-1445

154

Marmoset-1457

150

Human-390

150

Marmoset-1443

149

Human-121

145

Marmoset-1436

119

Marmoset-1452

94

Marmoset-1442

94

Marmoset-1444

93

Macaque-141

87

Marmoset-1440

78

Marmoset-1447

66

Macaque-480

65

Marmoset-1451

65

Human-387

56

Marmoset-1448

55

Human-386

52

Macaque-139

49

Macaque-481

45

Marmoset-1450

41

Marmoset-1437

40

Marmoset-1454

40

Human-376

39

Human-421

38

Marmoset-1438

33

Marmoset-1453

28

Marmoset-1449

28

Marmoset-1439

28

Human-388

23

Human-120

20

Human-420

18

Marmoset-1455

12