Cell Annotation Platform
v1
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
Sign In / Join
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons | CAP
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
Main
Summary
Feedback
Cell Metadata
cluster
subclass
class
supertype
Molecular Data
Download Dataset
0247 NDB-SI-MA-STRv Lhx8 Gaba_4
Full Name
0247 NDB-SI-MA-STRv Lhx8 Gaba_4
Closest Ontology Term
medial ganglionic eminence derived interneuron
CL:4023063
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
interneuron
CL:0000099
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
—
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
Gpr174
,
Sox6
,
Sfta3-ps
Canonical Marker Genes
unknown
Rationale
NA
Inherited from supertype
Set of Labels Description
The second finest level of cell type definition in the mouse whole brain taxonomy. All cells within a cluster belong to the same supertype. Supertype groups together similar clusters.
Annotation Method
manual