Cell Annotation Platform

v1 A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons

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An effort by the Villani, Kharchenko, Gehlenborg, Theis, Marioni, and Regev labs.

Whole Mouse Brain Taxonomy, Cerebral nuclei neurons | CAP

Whole Mouse Brain Taxonomy, Cerebral nuclei neurons

Main

Cell Metadata

subclass

The coarse level of cell type definition in the mouse whole brain taxonomy. All cells within a supertype belong to the same subclass. Subclass groups together related supertypes.
Annotation method: manual

Cell Relationships

subclass

class

subclass

supertype

subclass

cluster