Cell Annotation Platform
v1
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
Sign In / Join
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
Main
Summary
Feedback
Cell Metadata
cluster
subclass
class
supertype
0845 Sst Chodl Gaba_1
Full Name
0845 Sst Chodl Gaba_1
Closest Ontology Term
sst chodl GABAergic cortical interneuron
CL:4023121
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
sst GABAergic cortical interneuron
CL:4023017
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
—
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
Gm31218
,
Tshr
,
Ecel1
,
Adamts5
Canonical Marker Genes
unknown
Rationale
NA
Inherited from cluster
Set of Labels Description
The finest level of cell type definition in the mouse whole brain taxonomy. Cells within a cluster share similar characteristics and belong to the same supertype.
Annotation Method
manual
Molecular Data
Download Dataset