Cell Annotation Platform
v1
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Whole Mouse Brain Taxonomy, Pallium GABAergic interneurons
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Whole Mouse Brain Taxonomy, Pallium GABAergic interneurons
Main
Summary
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Cell Metadata
cluster
subclass
class
supertype
Molecular Data
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0221 Sst Gaba_8
Full Name
0221 Sst Gaba_8
Closest Ontology Term
sst GABAergic cortical interneuron
CL:4023017
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
medial ganglionic eminence derived GABAergic cortical interneuron
CL:4023069
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
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Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
Tnni3k
,
Sfrp2
,
Necab1
,
Sox6
Canonical Marker Genes
unknown
Rationale
NA
Inherited from supertype
Set of Labels Description
The second finest level of cell type definition in the mouse whole brain taxonomy. All cells within a cluster belong to the same supertype. Supertype groups together similar clusters.
Annotation Method
manual