Cell Annotation Platform
v1
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Whole Mouse Brain Taxonomy, non_neuronal
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Whole Mouse Brain Taxonomy, non_neuronal
Main
Summary
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Cell Metadata
class
supertype
cluster
subclass
Molecular Data
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1196 Monocytes NN_1
Full Name
1196 Monocytes NN_1
Closest Ontology Term
monocyte
CL:0000576
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
progenitor cell
CL:0011026
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
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Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
Il1b
,
S100a9
Canonical Marker Genes
unknown
Rationale
NA
Rationale DOI
NA
Inherited from supertype
Set of Labels Description
The second finest level of cell type definition in the mouse whole brain taxonomy. All cells within a cluster belong to the same supertype. Supertype groups together similar clusters.
Annotation Method
manual