Summary
Midbrain neurons, 19 MB Glut, 20 MB GABA, 21 MB Dopa and 22 MB-HB Sero
Metadata
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 209,303
- organism
- Mus musculus
- tissue
- midbrain (178,032 cells)dorsal plus ventral thalamus (25,604 cells)pons (3,300 cells)hypothalamus (1,866 cells)medulla oblongata (236 cells)cerebellum (182 cells)pallidum (50 cells)striatum (16 cells)hippocampal formation (15 cells)neocortex (1 cells)cerebral cortex (1 cells)
- assay
- 10x 3' v2 (104,652 cells)10x 3' v3 (104,651 cells)
- disease
- normal
Cell Labels
Description
The top level of cell type definition in the mouse whole brain taxonomy. It is primarily determined by broad brain region and neurotransmitter type. All cells within a subclass belong to the same class. Class provides a broader categorization of cell types.
Annotation Method
manual
Description
The coarse level of cell type definition in the mouse whole brain taxonomy. All cells within a supertype belong to the same subclass. Subclass groups together related supertypes.
Annotation Method
manual
Description
The second finest level of cell type definition in the mouse whole brain taxonomy. All cells within a cluster belong to the same supertype. Supertype groups together similar clusters.
Annotation Method
manual
Description
The finest level of cell type definition in the mouse whole brain taxonomy. Cells within a cluster share similar characteristics and belong to the same supertype.
Annotation Method
manual
