Whole Mouse Brain Taxonomy, 17 MH-LH Glut

Summary

Habenula glutamatergic neurons

Metadata

Dataset Type

Integrated. The file includes an integrated collection of datasets.

Total Cells

10,770

organism

Mus musculus

disease

normal

assay

10x 3' v3 (5,385 cells)10x 3' v2 (5,385 cells)

tissue

dorsal plus ventral thalamus (10,726 cells)midbrain (35 cells)hypothalamus (6 cells)striatum (2 cells)hippocampal formation (1 cells)

Cell Labels

class (1)

10,770 cells

17 MH-LH Glut

10,770

cluster (35)

10,770 cells

2587 MH Tac2 Glut_3

1,191

2580 MH Tac2 Glut_1

1,181

2599 LH Pou4f1 Sox1 Glut_1

1,162

2592 MH Tac2 Glut_3

757

2590 MH Tac2 Glut_3

756

2589 MH Tac2 Glut_3

532

2581 MH Tac2 Glut_1

468

2591 MH Tac2 Glut_3

452

2578 MH Tac2 Glut_1

418

2593 MH Tac2 Glut_3

413

2583 MH Tac2 Glut_2

338

2579 MH Tac2 Glut_1

257

2606 LH Pou4f1 Sox1 Glut_3

234

2588 MH Tac2 Glut_3

230

2585 MH Tac2 Glut_2

215

2598 MH Tac2 Glut_5

188

2602 LH Pou4f1 Sox1 Glut_2

183

2603 LH Pou4f1 Sox1 Glut_2

175

2608 LH Pou4f1 Sox1 Glut_3

173

2600 LH Pou4f1 Sox1 Glut_1

136

2586 MH Tac2 Glut_2

135

2601 LH Pou4f1 Sox1 Glut_2

124

2584 MH Tac2 Glut_2

109

2595 MH Tac2 Glut_4

106

2607 LH Pou4f1 Sox1 Glut_3

104

2612 LH Pou4f1 Sox1 Glut_4

91

2610 LH Pou4f1 Sox1 Glut_4

88

2605 LH Pou4f1 Sox1 Glut_2

85

2596 MH Tac2 Glut_5

83

2604 LH Pou4f1 Sox1 Glut_2

83

2582 MH Tac2 Glut_2

81

2609 LH Pou4f1 Sox1 Glut_4

75

2611 LH Pou4f1 Sox1 Glut_4

54

2597 MH Tac2 Glut_5

51

2594 MH Tac2 Glut_4

42

subclass (2)

10,770 cells

145 MH Tac2 Glut

8,003

146 LH Pou4f1 Sox1 Glut

2,767

supertype (9)

10,770 cells

0634 MH Tac2 Glut_3

4,331

0632 MH Tac2 Glut_1

2,324

0637 LH Pou4f1 Sox1 Glut_1

1,298

0633 MH Tac2 Glut_2

878

0638 LH Pou4f1 Sox1 Glut_2

650

0639 LH Pou4f1 Sox1 Glut_3

511

0636 MH Tac2 Glut_5

322

0640 LH Pou4f1 Sox1 Glut_4

308

0635 MH Tac2 Glut_4

148