SMC Inner Muscle Cells
Full Name
- inner smooth muscle cells
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.- unknown
Category
Class of which the cell type is a subclass.- smooth muscle cellCL:0000192
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.- —
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.- FOXF2, MORN5
Rationale
- SMC with FOXF2 and MORN5, likely inner circular smooth muscle layer of gut wall. Tissue section should be checked for these to ensure not myofibroblast
Inherited from Prelim annotation
- Set of Labels Description
- Cell annotations (Prelim annotation) are based on the finest possible label that could be used to describe each of the ~500 clusters found during integration and subclustering
- Annotation Method
- both
- Algorithm Name
- scVI
- Algorithm Version
- 1.3.2
- Algorithm URL
- https://github.com/scverse/scvi-tools
