Human lymph nodes with partial T and B cell depletion

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Cell Metadata

pDC

Ontology Term: plasmacytoid dendritic cellCL:0000784
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: dendritic cellCL:0000451
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: HLA-DRA, CD74, IL3RA, LILRA4, TCF4, IRF4,
Canonical Marker Genes: IL3RA, TCF4, IRF4,
Rationale: This cell type was annotated given expression of canoncial markers, including a known expression of GZMB

Set of Labels Description: Cell annotations were based on the finest possible label that could describe the 16 clusters found following integration and clustering.
Annotation Method: manual

Ontology Term: plasmacytoid dendritic cellCL:0000784
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: dendritic cellCL:0000451
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: HLA-DRA, CD74, IL3RA, LILRA4, TCF4, IRF4,
Canonical Marker Genes: IL3RA, TCF4, IRF4,
Rationale: This cell type was annotated given expression of canoncial markers, including a known expression of GZMB

Set of Labels Description: Cell annotations were based on the finest possible label that could describe the 16 clusters found following integration and clustering.
Annotation Method: manual