Human lymph nodes with partial T and B cell depletion

Main

Cell Metadata

Plasma_cells

Ontology Term: plasma cellCL:0000786
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: antibody secreting cellCL:0000946
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: IGHG1, CD27, SOX5, PRDM1, XBP1, SLAMF7, MZB1,
Canonical Marker Genes: CD27, CD38, IGGH1
Rationale: This cell type was annotated given expression of canoncial markers
Rationale DOI: doi.org/10.1016/j.ebiom.2025.106036

Set of Labels Description: Cell annotations were based on the finest possible label that could describe the 16 clusters found following integration and clustering.
Annotation Method: manual

Ontology Term: plasma cellCL:0000786
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: antibody secreting cellCL:0000946
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: IGHG1, CD27, SOX5, PRDM1, XBP1, SLAMF7, MZB1,
Canonical Marker Genes: CD27, CD38, IGGH1
Rationale: This cell type was annotated given expression of canoncial markers
Rationale DOI: doi.org/10.1016/j.ebiom.2025.106036

Set of Labels Description: Cell annotations were based on the finest possible label that could describe the 16 clusters found following integration and clustering.
Annotation Method: manual