Massier 2023 — abdominal subcutaneous and omental adipose tissue

Main

Cell Metadata

Vascular

Ontology Term: endothelial cellCL:0000115
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: endotheliocyte
Category Class of which the cell type is a subclass.: eukaryotic cellCL:0000255
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CA4, ACKR1, EFNB2, LDLR, NCKAP5, APOD, LYVE1, ACTA2, TIMP1, TYROBP, CD48, PCDH10
Canonical Marker Genes: CA4, ACKR1, EFNB2, LDLR, NCKAP5, APOD, LYVE1, ACTA2, TIMP1, TYROBP, CD48, PCDH10
Rationale: Selected marker genes for vascular cells across all clusters (Fig. 3b of publication).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge & gene expression data. Supplementary Table 2 of publication.
Annotation Method: manual

Ontology Term: endothelial cellCL:0000115
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: endotheliocyte
Category Class of which the cell type is a subclass.: eukaryotic cellCL:0000255
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CA4, ACKR1, EFNB2, LDLR, NCKAP5, APOD, LYVE1, ACTA2, TIMP1, TYROBP, CD48, PCDH10
Canonical Marker Genes: CA4, ACKR1, EFNB2, LDLR, NCKAP5, APOD, LYVE1, ACTA2, TIMP1, TYROBP, CD48, PCDH10
Rationale: Selected marker genes for vascular cells across all clusters (Fig. 3b of publication).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge & gene expression data. Supplementary Table 2 of publication.
Annotation Method: manual