Massier 2023 — abdominal subcutaneous and omental adipose tissue

Main

Cell Metadata

Adipocyte

Ontology Term: adipocyteCL:0000136
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: adipose cell, fat cell
Category Class of which the cell type is a subclass.: connective tissue cellCL:0002320
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PPARG, WDPCP, PDE3B
Canonical Marker Genes: PPARG, WDPCP, PDE3B
Rationale: PPARG, WDPCP, and PDE3B were higher expressed in snSeq datasets (Emont et al., Massier et al., Sun et al., integrated object).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge & gene expression data. Supplementary Table 2 of publication.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: adipocyteCL:0000136
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: adipose cell, fat cell
Category Class of which the cell type is a subclass.: connective tissue cellCL:0002320
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PPARG, WDPCP, PDE3B
Canonical Marker Genes: PPARG, WDPCP, PDE3B
Rationale: PPARG, WDPCP, and PDE3B were higher expressed in snSeq datasets (Emont et al., Massier et al., Sun et al., integrated object).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge & gene expression data. Supplementary Table 2 of publication.
Annotation Method: manual