All cells from human liver dataset

cDC1s

Full Name

conventional type 1 dendritic cell

Closest Ontology Term

conventional dendritic cellCL:0000990

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

cDC1, DC1

Category

Class of which the cell type is a subclass.

dendritic cellCL:0000451

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

CLEC9A, TACSTD2, IDO1, WDFY4, C1orf54, HLA-DOB, CLNK, CPVL, EGLN3, DNASE1L3

Canonical Marker Genes

XCR1, IRF8, CLEC9A

Rationale

Marker genes are top 10 DEGs for these cells compared with rest of UMAP (from Table S1 in publication).

Inherited from author_cell_type

Set of Labels Description

Annotation of cells in dataset based on prior knowledge.

Annotation Method

manual