All cells from human liver dataset

Main

Cell Metadata

Plasma cells

Ontology Term: plasma cellCL:0000786
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: plasma B cell
Category Class of which the cell type is a subclass.: antibody secreting cellCL:0000946
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: RP11-731F5.2, JCHAIN, IGLL5, TNFRSF17, RP11-16E12.2
Canonical Marker Genes: JCHAIN
Rationale: The marker genes are the top 10 DEGs for this population compared with the rest of the UMAP (from Table S1 in publication).

Set of Labels Description: Annotation of cells in dataset based on prior knowledge.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: plasma cellCL:0000786
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: plasma B cell
Category Class of which the cell type is a subclass.: antibody secreting cellCL:0000946
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: RP11-731F5.2, JCHAIN, IGLL5, TNFRSF17, RP11-16E12.2
Canonical Marker Genes: JCHAIN
Rationale: The marker genes are the top 10 DEGs for this population compared with the rest of the UMAP (from Table S1 in publication).

Set of Labels Description: Annotation of cells in dataset based on prior knowledge.
Annotation Method: manual