All cells from human liver dataset

Main

Cell Metadata

Hepatocytes

Ontology Term: hepatocyteCL:0000182
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: epithelial cellCL:0000066
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CYP2C8, CYP3A4, CYP2E1, CP, CYP3A43, CUX2, SORBS2, SBDS, ZNF385D, ERRFI1
Canonical Marker Genes: ALB, TTR
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S1 in publication).

Set of Labels Description: Annotation of cells in dataset based on prior knowledge.
Annotation Method: manual

Ontology Term: hepatocyteCL:0000182
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: epithelial cellCL:0000066
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CYP2C8, CYP3A4, CYP2E1, CP, CYP3A43, CUX2, SORBS2, SBDS, ZNF385D, ERRFI1
Canonical Marker Genes: ALB, TTR
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S1 in publication).

Set of Labels Description: Annotation of cells in dataset based on prior knowledge.
Annotation Method: manual