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HMBA Consensus Basal Ganglia Atlas

Main
Summary
Molecular Data
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Type
Cell Labels

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Explore other scientists feedback or go to the Molecular Data page and select a cell label to provide your feedback.

Neighborhood / Subpallium GABA
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Wubin Ding avatar
Wubin Ding sent "I don't know"

Hello ~ I like this browser, it looks great; I am wondering whether it is possible to upload single-cell DNA methylation adata onto this platform. You need to make some changes to visualize single-cell DNA methylation. I would be happy to discuss with you about how to host the DNA methylation data on CAP. Please feel free to contact me (wding@salk.edu) if you are interested in adding DNA methylation data.

Subclass / STR D2 MSN
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do12 avatar
do12 sent refinements
Ontology Term
cell CL:0000000
striosomal D2 medium spiny neuron CL:4030049
Synonyms
Unknown
D2-striosomestriosome D2 medium spiny neuronD2Sstriosome D2-MSN

Subclass / Oligodendrocyte
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1

do12 avatar
do12 sent refinements
Ontology Term
cell CL:0000000
oligodendrocyte CL:0000128
Synonyms
Unknown
oligodendrogliaOLs

Group / STH PVALB-PITX2 Glut
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Wubin Ding avatar
Wubin Ding sent "I don't know"

In our DNA methylation data, Group STH PVALB-PITX2 Glut (Subclass is F Glut) and VTR-HTH Glut (Subclass is F M Glut) are mixed together at the Subclass level. Is it possible to combine these two groups into one Subclass (such as F M Glut)