Human liver cell atlas - endothelia cells

Summary

Cells lining the liver vasculature, including liver sinusoidal endothelial cells, regulating filtration and cell trafficking.

These are version 1 cell type labels and may be subject to change.

Metadata

Dataset Type: Integrated. The file includes an integrated collection of datasets.
Total Cells: 86,530
organism: Homo sapiens
tissue: left lobe of liver (30,162 cells)right lobe of liver (24,427 cells)caudate lobe of liver (17,916 cells)liver (14,025 cells)
assay: 10x 3' v3 (73,619 cells)10x 3' v2 (10,133 cells)10x 5' v1 (2,778 cells)
disease: normal

Cell Labels

author_cell_type

Description

HLiCA classifies cells into six lineages and 48 distinct cell types, 18 more than previous studies. Rigorous benchmarking ensured robust integration across technical and biological variables. Expanded annotations allowed identification of previously undetected liver cell types. As the largest human liver cell atlas, HLiCA serves as a genetically diverse, well-annotated reference.

Annotation Method

both

28,433

23,642

22,202

5,291

Vascular Endothelial Cell

4,175

LSEC

1,957

Lymphatic

628

Cycling

202