Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas stromal lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 52,159
- assay
- 10x 3' v2 (31,289 cells)10x 3' v3 (19,348 cells)10x 5' v1 (1,492 cells)10x 5' v2 (30 cells)
- disease
- normal (33,322 cells)Crohn disease (11,840 cells)colorectal cancer (4,486 cells)digestive system disorder (2,511 cells)
- organism
- Homo sapiens
- tissue
- ileum (24,146 cells)colon (10,359 cells)ascending colon (9,934 cells)rectum (2,295 cells)sigmoid colon (1,947 cells)transverse colon (1,190 cells)caecum (1,173 cells)jejunum (276 cells)vermiform appendix (245 cells)gastrointestinal system mesentery (226 cells)duodenum (223 cells)descending colon (140 cells)small intestine (5 cells)
