Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas myeloid lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 52,311
- organism
- Homo sapiens
- assay
- 10x 3' v3 (33,192 cells)10x 3' v2 (13,476 cells)10x 5' v1 (2,987 cells)10x 5' v2 (2,618 cells)10X 5' v3 (38 cells)
- disease
- normal (34,496 cells)Crohn disease (12,523 cells)Abnormality of the gastrointestinal tract (3,460 cells)colorectal cancer (1,462 cells)digestive system disorder; inflammatory disease (370 cells)
- tissue
- ileum (24,899 cells)jejunum (17,322 cells)colon (5,690 cells)caecum (1,036 cells)transverse colon (972 cells)rectum (878 cells)sigmoid colon (803 cells)duodenum (519 cells)gastrointestinal system mesentery (84 cells)descending colon (52 cells)vermiform appendix (34 cells)small intestine (22 cells)
