CAP AnnData Package

CAP-AnnData offers functionalities for selective reading and writing of AnnData file fields without the need for loading the entire dataset (or even entire field) into memory. For example, it allow for reading and modifying a single obs column with taking nothing into memory except the selected column. The package replicates the original AnnData API as much as possible, while providing additional features for efficient data manipulation for heavy datasets.

Please see the GitHub repo for more information: CAP AnnData GitHub repo