Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas myeloid lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 50,296
- assay
- 10x 3' v3 (31,738 cells)10x 3' v2 (13,149 cells)10x 5' v1 (2,777 cells)10x 5' v2 (2,594 cells)10x 5' v3 (38 cells)
- disease
- normal (33,291 cells)Crohn disease (11,902 cells)digestive system disorder (3,303 cells)colorectal cancer (1,468 cells)enteritis (332 cells)
- organism
- Homo sapiens
- tissue
- ileum (23,359 cells)jejunum (17,177 cells)colon (3,589 cells)ascending colon (1,781 cells)caecum (1,035 cells)transverse colon (966 cells)rectum (877 cells)sigmoid colon (802 cells)duodenum (517 cells)gastrointestinal system mesentery (87 cells)descending colon (51 cells)vermiform appendix (33 cells)small intestine (22 cells)
