Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas epithelial lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 274,859
- organism
- Homo sapiens
- assay
- 10x 3' v3 (191,333 cells)10x 3' v2 (76,708 cells)10x 5' v1 (5,459 cells)10x 5' v2 (1,217 cells)10X 5' v3 (142 cells)
- disease
- normal (218,811 cells)Crohn disease (37,256 cells)adenocarcinoma (12,402 cells)colorectal cancer (2,925 cells)neuroendocrine carcinoma (2,776 cells)Abnormality of the gastrointestinal tract (642 cells)digestive system disorder; inflammatory disease (47 cells)
- tissue
- ileum (182,806 cells)colon (59,352 cells)duodenum (6,837 cells)transverse colon (5,884 cells)sigmoid colon (5,559 cells)rectum (5,206 cells)jejunum (3,930 cells)descending colon (2,102 cells)small intestine (1,910 cells)caecum (1,175 cells)vermiform appendix (98 cells)
