Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas stromal lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 52,881
- organism
- Homo sapiens
- assay
- 10x 3' v2 (31,340 cells)10x 3' v3 (20,009 cells)10x 5' v1 (1,502 cells)10x 5' v2 (30 cells)
- disease
- normal (33,978 cells)Crohn disease (11,910 cells)colorectal cancer (4,509 cells)Abnormality of the gastrointestinal tract (2,484 cells)
- tissue
- ileum (24,287 cells)colon (20,832 cells)rectum (2,299 cells)sigmoid colon (1,949 cells)transverse colon (1,209 cells)caecum (1,190 cells)jejunum (276 cells)vermiform appendix (244 cells)gastrointestinal system mesentery (226 cells)duodenum (224 cells)descending colon (140 cells)small intestine (5 cells)
