Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas lymphoid lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 579,238
- organism
- Homo sapiens
- assay
- 10x 3' v3 (302,644 cells)10x 3' v2 (129,893 cells)10x 5' v1 (87,164 cells)10x 5' v2 (38,839 cells)10X 5' v3 (20,698 cells)
- disease
- normal (463,562 cells)Crohn disease (64,781 cells)colorectal cancer (17,165 cells)digestive system disorder; inflammatory disease (14,671 cells)Abnormality of the gastrointestinal tract (11,278 cells)polyposis (7,537 cells)adenocarcinoma (113 cells)unknown (85 cells)necrotizing enterocolitis (46 cells)
- tissue
- ileum (186,030 cells)jejunum (171,792 cells)colon (159,787 cells)gastrointestinal system mesentery (26,120 cells)caecum (9,249 cells)transverse colon (8,913 cells)sigmoid colon (8,751 cells)duodenum (5,235 cells)rectum (1,539 cells)small intestine (802 cells)vermiform appendix (608 cells)descending colon (412 cells)
